![]() |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bv3_062960_chhy.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 449aa MW: 49511.6 Da PI: 7.8271 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.3e-10 | 164 | 204 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Bv3_062960_chhy.t1 164 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 204 788*************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.6E-9 | 160 | 223 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 162 | 206 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.5E-7 | 164 | 204 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-6 | 164 | 207 | No hit | No description |
CDD | cd14708 | 3.26E-21 | 164 | 215 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-7 | 165 | 209 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 167 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.3E-32 | 247 | 321 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 449 aa Download sequence Send to blast |
MGSKKVKIGT KNGASLTSGM PSFIPSIPIS NSIVTEGDNA SSSRISELGA FEQSLDFRIE 60 DAVDLRNPLF SSLKSSSVPV GPDQFGSFNK ILSLERESPL NLASVSVAHR ENWAESNMAD 120 ASPRTDTSTD DTEDRNPLLE AGHINSKAAS DSSERSKEKV TDQKSLRRLA QNREAARKSR 180 LRKKAYVQQL ENSRLKLTQL EQELQRARQQ GIFISNAGDQ SHGLGGNGAL AFDAEYARWL 240 EEQNRMINEL RTAVNSHASD TELQTVVKSV AAHFDEIFRL KGVAAKADVF HILSGMWKTP 300 AERCFMWIGG FRPSELLKLL VNQLEPLTEQ QLVNIYNLQQ SSQQAEEALS QGMEALQQSL 360 AETLANGTAG STGSSGNVAN YMGQMAMAMG KLGTLEGFLR QADNLRQQTL QQMHLILTTR 420 QSARAILSIH DYFSRLRALS SLWLARPRD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010673021.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38)-like isoform X1 | ||||
Swissprot | O24160 | 0.0 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | A0A0J8CTA6 | 0.0 | A0A0J8CTA6_BETVU; Uncharacterized protein | ||||
STRING | VIT_08s0007g05170.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-134 | bZIP family protein |